A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences.
Claudia ChicaAlberto LabargaCathryn M. GouldRodrigo LopezToby J. GibsonPublished in: BMC Bioinform. (2008)
Keyphrases
- protein sequences
- biological sequences
- structural motifs
- scoring methods
- multiple sequence alignment
- multiple alignment
- computational biology
- sequence alignment
- amino acids
- protein structure
- protein families
- comparative evaluation
- sequence analysis
- motif finding
- genome sequences
- protein structure prediction
- binding sites
- amino acid sequences
- protein function
- sequential pattern mining
- protein classification
- secondary structure