Pairwise sequence alignment for very long sequences on GPUs.

Junjie Li Sanjay Ranka Sartaj Sahni

Published in: Int. J. Bioinform. Res. Appl. (2014)

Keyphrases

sequence alignment
long sequences
pairwise
data streams
similarity measure
gpu accelerated
mining sequential patterns
phylogenetic analysis
multiple alignment
markov random field
dynamic programming
binding sites
comparative genomics
multiple sequence alignment
amino acids
mining algorithm
medical images