Inference of sparse gene regulatory network from RNA-Seq time series data.
Alireza KarbalaygharehTao HuPublished in: GlobalSIP (2015)
Keyphrases
- gene regulatory networks
- undirected graphical models
- rna seq
- dynamic bayesian networks
- bayesian inference
- high dimensional
- biological data
- graphical models
- reverse engineering
- gene expression data
- network model
- conditional random fields
- high throughput
- systems biology
- gene regulation
- probabilistic inference
- metropolis hastings algorithm
- biological networks
- probabilistic model
- microarray
- approximate inference
- microarray data
- gene expression
- parameter estimation
- bayesian networks
- alternative splicing
- databases
- real time