Variable context Markov chains for HIV protease cleavage site prediction.
Hasan OgulPublished in: Biosyst. (2009)
Keyphrases
- hiv protease
- markov chain
- coarse grained
- human immunodeficiency virus
- fine grained
- transition probabilities
- protein protein interactions
- random walk
- sequence analysis
- markov processes
- probabilistic automata
- transition matrix
- state space
- linear support vector machines
- encoding schemes
- stationary distribution
- finite automata
- markov models
- sequence data
- data analysis