HapCompass: A Fast Cycle Basis Algorithm for Accurate Haplotype Assembly of Sequence Data.

Derek Aguiar Sorin Istrail

Published in: J. Comput. Biol. (2012)

Keyphrases

sequence data
learning algorithm
dynamic programming
detection algorithm
computationally efficient
k means
spatio temporal
np hard
high accuracy
sequence classification
expectation maximization
higher order
biological data
graphical models
semi supervised
probabilistic model
objective function