Optimizing Pattern-Matching for Memory-Efficient Heterogeneous DNA Processing in Bioinformatics.

Ciprian Pungila Darius Galis Viorel Negru

Published in: SACI (2018)

Keyphrases

pattern matching
memory efficient
multiple sequence alignment
sequence analysis
pattern matching algorithm
regular expressions
matching process
tree matching
approximate pattern matching
dna sequences
string matching
iterative deepening
text mining
bit parallel
database systems
boyer moore
matching strategy