A new dot plot-based algorithm for genomes sequences comparison: A preliminary study.
Mohamed TounsiMajed Al-MashariPublished in: Expert Syst. Appl. (2006)
Keyphrases
- optimization algorithm
- times faster
- theoretical analysis
- learning algorithm
- matching algorithm
- computational complexity
- preprocessing
- significant improvement
- high accuracy
- hidden markov models
- dynamic programming
- recognition algorithm
- tree structure
- segmentation algorithm
- neural network
- experimental evaluation
- cost function
- improved algorithm
- optimal solution
- convergence rate
- computational cost
- sequence alignment
- sequence matching
- particle swarm optimization
- np hard
- search space
- objective function
- genetic algorithm