HaploCart: Human mtDNA haplogroup classification using a pangenomic reference graph.
Joshua Daniel RubinNicola Alexandra VogelShyam GopalakrishnanPeter Wad SackettGabriel RenaudPublished in: PLoS Comput. Biol. (2023)
Keyphrases
- automatic classification
- pattern recognition
- supervised learning
- classification systems
- classification accuracy
- machine learning
- support vector machine
- feature vectors
- graph matching
- classification scheme
- feature extraction
- decision trees
- machine learning methods
- classification rate
- preprocessing stage
- classification method
- classification algorithm
- decision rules
- benchmark datasets
- support vector
- structured data
- machine learning algorithms
- text classification
- training set
- feature space
- bipartite graph
- directed acyclic graph
- object recognition
- training data
- feature selection
- graph partitioning
- graph representation
- classification process
- data sets