A Hierarchical Mixture of Markov Models for Finding Biologically Active Metabolic Paths Using Gene Expression and Protein Classes.
Hiroshi MamitsukaYasushi OkunoPublished in: CSB (2004)
Keyphrases
- gene expression
- markov models
- regulatory networks
- drosophila melanogaster
- microarray
- markov model
- maximum entropy
- protein interaction
- gene expression data
- dna binding
- regulatory elements
- higher order
- microarray data
- hidden markov models
- gene expression patterns
- saccharomyces cerevisiae
- biological processes
- sequence data
- conditional random fields
- gene selection
- gene regulation
- binding sites
- transcription factors
- gene expression profiles
- biologically relevant
- protein protein interactions
- information extraction
- experimental conditions
- biological data
- high throughput
- signaling pathways
- genomic data
- systems biology
- biological networks