The Algorithm and Scheme of Prediction in RNA Folding Structure with Pseudoknots.
Zhendong LiuQingxia KongYaoyao FuHongchao YeShimin ZhaoXinhong SuKai JiangHui WangKunle DongZhenxiong SongYujie WangPublished in: CIS (2017)
Keyphrases
- rna secondary structure prediction
- rna secondary structures
- learning algorithm
- preprocessing
- dynamic programming
- worst case
- prediction algorithm
- np hard
- computational complexity
- particle swarm optimization
- matching algorithm
- prediction error
- optimal solution
- k means
- detection algorithm
- rna sequences
- similarity measure
- pairwise
- probabilistic model
- expectation maximization
- secondary structure
- image segmentation