PhenoLinker: Phenotype-Gene Link Prediction and Explanation using Heterogeneous Graph Neural Networks.
Jose L. Mellina AndreuLuis BernalAntonio F. SkarmetaMina RytenSara ÁlvarezAlejandro Cisterna GarcíaJuan A. BotíaPublished in: CoRR (2024)
Keyphrases
- link prediction
- random walk
- bipartite graph
- graph mining
- biologically meaningful
- biological networks
- neural network
- heterogeneous networks
- gene expression
- link formation
- social networks
- social network analysis
- network analysis
- graph kernels
- complex networks
- multi relational
- network structure
- topological features
- link structure
- proximity measures
- community detection
- microarray
- markov chain
- web graph
- protein interaction networks
- graph theory
- gene expression data
- collaborative filtering
- missing links
- training data
- entity resolution
- genome wide
- functional modules
- structured data
- microarray data