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Fixed-parameter algorithms for protein similarity search under mRNA structure constraints.
Guillaume Blin
Guillaume Fertin
Danny Hermelin
Stéphane Vialette
Published in:
J. Discrete Algorithms (2008)
Keyphrases
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similarity search
indexing structure
similarity measure
indexing techniques
metric space
similarity searching
sequence databases
distance function
query processing
r tree
knn
distance calculation
data sets
protein sequences
similarity queries
similarity retrieval
pattern recognition