METADOCK 2: a high-throughput parallel metaheuristic scheme for molecular docking.
Baldomero ImbernónAntonio SerranoAndrés Bueno-CrespoJosé L. AbellánHoracio Pérez SánchezJosé M. CeciliaPublished in: Bioinform. (2021)
Keyphrases
- high throughput
- metaheuristic
- ant colony optimization
- genome wide
- simulated annealing
- microarray
- tabu search
- living cells
- scatter search
- mass spectrometry
- optimization problems
- biological data
- systems biology
- combinatorial optimization
- path relinking
- search space
- vehicle routing problem
- protein protein
- protein protein interactions
- virtual screening
- interaction networks
- optimal solution
- mass spectrometry data
- genomic data
- genetic algorithm
- drug discovery
- iterated local search
- multi start
- gene expression
- guided local search
- ant colony optimization metaheuristic
- particle swarm optimization
- benchmark instances
- proteomic data
- vehicle routing problem with time windows
- variable neighborhood search
- evolutionary algorithm
- set of benchmark instances
- signaling pathways
- search algorithm
- monitoring system
- data acquisition
- greedy randomized adaptive search procedure