Parallel performance evaluation of multithreaded local sequence alignment.

Plamenka Borovska Veska Gancheva Galin Dimitrov Krasimir Chintov

Published in: CompSysTech (2011)

Keyphrases

sequence alignment
pairwise
parallel programming
shared memory
distributed memory
protein sequences
gpu accelerated
amino acids
dynamic programming
multiple alignment
phylogenetic analysis
binding sites
parallel algorithm
parallel implementation
parallel processing
comparative genomics
parallel computing