SeqGL Identifies Context-Dependent Binding Signals in Genome-Wide Regulatory Element Maps.
Manu SettyChristina S. LesliePublished in: PLoS Comput. Biol. (2015)
Keyphrases
- context dependent
- genome wide
- dna binding
- cis regulatory
- transcription factors
- high throughput
- linkage disequilibrium
- transcriptional regulation
- chip seq
- transcription factor binding sites
- natural language
- human genome
- low level
- context free
- binding sites
- high level
- high throughput sequencing
- microarray
- decision trees
- independent component analysis
- data mining
- gene gene interactions
- co occurrence
- machine learning
- differential expression
- data sets