Data structures and compression algorithms for genomic sequence data.
Marty C. BrandonDouglas C. WallacePierre BaldiPublished in: Bioinform. (2009)
Keyphrases
- sequence data
- compression algorithm
- data structure
- image compression
- data compression
- compression ratio
- bitstream
- sequence classification
- nucleotide sequences
- sequence analysis
- compression scheme
- wavelet based image
- quadtree decomposition
- cosine transform
- wavelet compression
- genome sequences
- jpeg images
- profile hidden markov models
- embedded zerotree wavelet
- biological sequences
- file size
- multiresolution
- high quality
- gene clusters
- feature extraction
- regulatory elements
- suffix tree
- wavelet transform
- multiscale