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Efficient counting of k-mers in DNA sequences using a Bloom Filter.

Páll MelstedJonathan K. Pritchard
Published in: BMC Bioinform. (2011)
Keyphrases
  • dna sequences
  • bloom filter
  • space efficient
  • tandem repeats
  • reservoir sampling
  • gene structure prediction
  • databases
  • binding sites
  • human genome
  • biological sequences
  • sequence patterns
  • data integration