iMIRAGE: an R package to impute microRNA expression using protein-coding genes.
Aritro NathJeremy ChangRong Stephanie HuangPublished in: Bioinform. (2020)
Keyphrases
- expression profiles
- binding sites
- protein protein interactions
- gene expression levels
- gene prediction
- coding regions
- gene sets
- dna binding
- dna sequences
- gene expression
- microarray data
- gene ontology
- microarray
- protein interaction data
- protein function
- transcriptional regulation
- cell cycle
- gene expression profiles
- protein interaction
- essential genes
- protein coding regions
- protein sequences
- cis regulatory
- drosophila melanogaster
- transcription factors
- saccharomyces cerevisiae
- computational methods
- regulatory elements
- high throughput
- homo sapiens
- sequence data
- biological processes
- human genome
- gene expression data
- protein protein interaction networks
- sequence alignment
- missing values
- regulatory networks
- coding scheme
- microarray datasets
- amino acids
- statistical significance
- cellular processes
- transcription factor binding sites
- biological entities
- gene function
- genome sequences
- genomic data
- protein structure
- gene selection
- genome scale
- biological knowledge
- secondary structure
- protein complexes
- functional modules
- microarray data analysis
- gene regulation
- structural motifs
- experimental conditions