Multiple sequence alignment using the Hidden Markov Model trained by an improved quantum-behaved particle swarm optimization.
Jun SunXiaojun WuWei FangYanrui DingHaixia LongWenbo XuPublished in: Inf. Sci. (2012)
Keyphrases
- hidden markov models
- multiple sequence alignment
- quantum behaved particle swarm optimization
- baum welch
- discriminative training
- global search
- memory efficient
- protein sequences
- genetic algorithm
- convergence speed
- secondary structure
- computational biology
- particle swarm optimization
- particle swarm optimization pso
- biological sequences
- sequential data
- particle swarm optimisation
- sequence alignment
- phylogenetic trees
- simulated annealing
- ant colony optimization
- search engine