Corekaburra: pan-genome post-processing using core gene synteny.
Magnus G. JespersenAndrew HayesMark R. DaviesPublished in: J. Open Source Softw. (2022)
Keyphrases
- post processing
- comparative genomics
- sequence alignment
- gene clusters
- preprocessing
- escherichia coli
- genomic sequences
- phylogenetic analysis
- evolutionary history
- human experts
- pattern extraction
- microarray data
- microarray
- sequenced genomes
- gene ontology
- filtering method
- projections onto convex sets
- gene expression
- data mining process
- data mining
- genome scale
- cis regulatory
- high throughput sequencing
- shape error concealment
- genome rearrangements