Accurate Discrimination of outer membrane proteins using secondary Structure Element Alignment and Support Vector Machine.
Qingshan NiLingyun ZouPublished in: J. Bioinform. Comput. Biol. (2014)
Keyphrases
- secondary structure
- amino acid sequences
- multiple sequence alignment
- protein sequences
- support vector machine
- amino acids
- predicting protein
- protein structure
- rna sequences
- remote homology detection
- multiple alignment
- psi blast
- tertiary structure
- secondary structure of proteins
- computational methods
- protein function
- protein folding
- sequence similarity
- rna secondary structures
- structural features
- protein secondary structure
- sequence alignment
- molecular biology
- protein structure prediction
- feature selection
- computational biology
- rna secondary structure prediction
- solvent accessibility
- protein classification
- string kernels
- machine learning
- secondary structure prediction
- sequence analysis
- protein secondary structure prediction
- highly accurate
- computational approaches
- experimentally determined
- training data