Reverse engineering time series of gene expression data using Dynamic Bayesian networks and covariance matrix adaptation evolution strategy with explicit memory.
Maryam SalehiAlan AblesonParvin MousaviPublished in: CIBCB (2008)
Keyphrases
- cma es
- gene regulatory networks
- evolution strategy
- reverse engineering
- covariance matrix
- gene expression data
- dynamic bayesian networks
- evolutionary algorithm
- microarray
- differential evolution
- software engineering
- gene expression
- microarray data
- bayesian networks
- particle swarm optimization algorithm
- object oriented
- genetic algorithm
- data sets
- global search
- principal component analysis
- structure learning
- feature selection
- particle filtering
- data mining
- probabilistic model
- state variables
- neural network
- image processing
- optimization methods
- objective function
- multi objective
- sample size
- high dimensional data
- nearest neighbor