TAMC: A deep-learning approach to predict motif-centric transcriptional factor binding activity based on ATAC-seq profile.
Tianqi YangRicardo HenaoPublished in: PLoS Comput. Biol. (2022)
Keyphrases
- deep learning
- cis regulatory
- binding sites
- motif discovery
- transcription factors
- unsupervised learning
- unsupervised feature learning
- dna binding
- transcription factor binding sites
- machine learning
- mental models
- weakly supervised
- gene expression
- dna sequences
- genome wide
- regulatory networks
- gene regulation
- deep architectures
- learning algorithm
- domain specific
- viewpoint
- object recognition
- pattern recognition
- multiscale