An approach for proteins and their encoding genes synonyms integration based on protein ontology.
Xiaohong WangXiaoli JingFangkun DouHaowei CaoPublished in: BMC Bioinform. (2023)
Keyphrases
- dna binding
- protein interaction data
- biological entities
- protein protein interaction networks
- protein function
- saccharomyces cerevisiae
- protein protein interactions
- cellular processes
- homo sapiens
- protein sequences
- gene ontology
- amino acids
- protein interaction
- subcellular localization
- biological processes
- protein structure
- gene ontology terms
- amino acid sequences
- biological knowledge
- structural motifs
- protein complexes
- gene expression
- gene expression data
- gene expression profiles
- regulatory networks
- genome wide
- gene networks
- biomedical literature
- protein families
- signaling pathways
- protein folding
- interaction networks
- arabidopsis thaliana
- protein interaction networks
- gene products
- systems biology
- dna sequences
- microarray data
- protein structure prediction
- transcription factors
- gene regulatory networks
- binding sites
- disease genes
- biological data
- cell cycle
- contact map
- wordnet
- protein function prediction
- protein coding regions
- drug design
- genomic data
- computational biology
- molecular biology
- gene function
- microarray
- amino acid composition
- computational methods
- biological systems
- cis regulatory
- experimental conditions
- sequence similarity
- genome sequencing
- feature ranking
- protein structure alignment
- functional modules
- high throughput
- drug discovery
- co occurrence