PTMTreeSearch: a novel two-stage tree-search algorithm with pruning rules for the identification of post-translational modification of proteins in MS/MS spectra.
Attila Kertész-FarkasBeáta ReizRoberto VeraMichael P. MyersSándor PongorPublished in: Bioinform. (2014)
Keyphrases
- tandem mass spectrometry
- mass spectrometry
- ms ms
- tree search algorithm
- high throughput
- mass spectra
- protein sequences
- monte carlo tree search
- branch and bound
- search space
- tree search
- tandem mass
- vehicle routing problem
- monte carlo
- rule sets
- association rules
- protein protein interactions
- optimal solution
- drug discovery
- rule learning
- biological data
- evaluation function
- search algorithm
- data mining