Identifying Genes and Their Interactions from Pathway Figures and Text in Biomedical Articles.
Fei HeJoshua ThompsonZiting MaoYijie RenYulia NussbaumOlha KholodDmitriy ShinMark HanninkMihail PopescuDong XuPublished in: BIBM (2021)
Keyphrases
- medline abstracts
- manually annotated
- biomedical literature
- scientific literature
- text mining
- protein interaction
- keywords
- biomedical text
- annotated corpus
- scientific publications
- newspaper articles
- relation extraction
- financial news
- free text
- regulatory networks
- metabolic pathways
- related documents
- information extraction systems
- text documents
- gene expression
- medical subject headings
- information retrieval
- journal articles
- automatic extraction
- microarray data
- news articles
- biological knowledge
- interaction networks
- scientific documents
- information extraction
- data sets
- transcriptional regulatory
- signaling pathways
- news video
- systems biology
- entity extraction
- gene expression data
- text classification