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CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment.
Svetlin Manavski
Giorgio Valle
Published in:
BMC Bioinform. (2008)
Keyphrases
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sequence alignment
gpu accelerated
smith waterman
parallel implementation
graphics processors
pairwise
dynamic programming
protein sequences
parallel computing
gpu implementation
multi dimensional
machine learning
high dimensional
statistically significant
binding sites