Prediction of regulatory gene pairs using dynamic time warping and gene ontology.
Andy C. YangHui-Huang HsuMing-Da LuVincent S. TsengTimothy K. ShihPublished in: Int. J. Data Min. Bioinform. (2014)
Keyphrases
- gene ontology
- dynamic time warping
- protein interaction
- microarray
- protein protein interactions
- microarray expression data
- gene products
- distance measure
- semantic similarity
- euclidean distance
- gene clusters
- gene expression patterns
- gene expression
- similarity measure
- information theoretic
- signaling pathways
- protein function
- transcription factors
- gene function
- similarity search
- gene sets
- high throughput
- gene networks
- microarray data
- biological processes
- protein interaction networks
- biological networks
- edit distance
- gene expression data
- protein complexes
- database systems
- biomedical literature
- biological data
- knowledge discovery
- binding sites
- wordnet
- high precision