Mugsy: fast multiple alignment of closely related whole genomes.
Samuel V. AngiuoliSteven L. SalzbergPublished in: Bioinform. (2011)
Keyphrases
- closely related
- multiple alignment
- sequence alignment
- protein sequences
- multiple sequence alignment
- phylogenetic trees
- secondary structure
- sequential pattern mining
- pairwise
- mining sequential patterns
- graph theoretic
- sequence data
- computational biology
- dynamic programming
- scoring function
- np hard
- sequential patterns
- neural network
- amino acids
- information retrieval