Accelerating the BPMax Algorithm for RNA-RNA Interaction.
Chiranjeb MondalSanjay RajopadhyePublished in: IPDPS Workshops (2021)
Keyphrases
- rna secondary structure prediction
- computational complexity
- computational cost
- dynamic programming
- cost function
- preprocessing
- high accuracy
- detection algorithm
- optimal solution
- rna secondary structures
- search space
- experimental evaluation
- times faster
- optimization algorithm
- computationally efficient
- significant improvement
- linear programming
- input data
- learning algorithm
- human computer interaction
- segmentation algorithm
- improved algorithm
- mobile robot
- expectation maximization
- graph cuts
- worst case
- probabilistic model
- matching algorithm
- k means