Early cancer detection from genome-wide cell-free DNA fragmentation via shuffled frog leaping algorithm and support vector machine.
Linjing LiuXingjian ChenKa-Chun WongPublished in: Bioinform. (2021)
Keyphrases
- genome wide
- cancer detection
- shuffled frog leaping algorithm
- support vector machine
- high throughput
- high throughput sequencing
- gene selection
- dna binding
- microarray
- particle swarm optimization
- prostate cancer
- human genome
- dna copy number
- cis regulatory
- feature vectors
- support vector
- feature selection
- gene expression
- k nearest neighbor
- multi class
- machine learning
- support vector machine svm
- dna sequences
- systems biology
- cancer classification
- biological data
- training data
- training set
- genetic variation
- genetic algorithm
- transcription factors
- feature extraction
- gene expression data
- nearest neighbor
- knn
- feature space