A statistical approach for 5′ splice site prediction using short sequence motifs and without encoding sequence data.
Prabina Kumar MeherTanmaya Kumar SahuAtmakuri Ramakrishna RaoSant WahiPublished in: BMC Bioinform. (2014)
Keyphrases
- splice site
- sequence data
- sequence analysis
- biological sequences
- alternative splicing
- genome sequences
- binding sites
- sequence classification
- secondary structure
- motif discovery
- profile hidden markov models
- transcription factors
- statistical analysis
- machine learning
- sequence databases
- transcription factor binding sites
- sequence alignment
- statistical methods
- probabilistic model