Fitchi: haplotype genealogy graphs based on the Fitch algorithm.
Michael MatschinerPublished in: Bioinform. (2016)
Keyphrases
- dynamic programming
- experimental evaluation
- theoretical analysis
- graph isomorphism
- segmentation algorithm
- preprocessing
- computational cost
- optimization algorithm
- linear programming
- np hard
- k means
- objective function
- similarity measure
- optimal solution
- learning algorithm
- high accuracy
- particle swarm optimization
- graph structure
- combinatorial optimization
- detection algorithm
- decision trees
- cost function
- graph partitioning
- image segmentation
- bayesian networks
- expectation maximization
- simulated annealing