SPPPred: Sequence-Based Protein-Peptide Binding Residue Prediction Using Genetic Programming and Ensemble Learning.
Shima ShafieeAbdolhossein FathiGhazaleh TaherzadehPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2023)
Keyphrases
- ensemble learning
- amino acid residues
- amino acids
- mhc class ii
- protein structure
- amino acid sequences
- contact map
- protein sequences
- contact maps
- protein structure prediction
- generalization ability
- binding peptides
- ensemble methods
- protein function
- ensemble classifier
- dna sequences
- random forest
- prediction accuracy
- secondary structure
- protein chains
- base classifiers
- sequence analysis
- tandem mass spectra
- mutual subspace method
- protein families
- transcription factor binding sites
- hiv protease
- data sets
- concept drift