Deep attention network for identifying ligand-protein binding sites.
Fatemeh NazemReza RastiAfshin FassihiAlireza Mehri DehnaviFahimeh GhasemiPublished in: J. Comput. Sci. (2024)
Keyphrases
- binding sites
- protein protein
- interaction networks
- virtual screening
- dna binding
- protein interaction
- protein complexes
- sequence alignment
- protein protein interactions
- gene expression
- dna sequences
- computational methods
- regulatory elements
- transcription factors
- protein sequences
- transcription factor binding sites
- statistical significance
- drosophila melanogaster
- high throughput
- sequence data
- drug design
- protein function
- predicting protein
- protein structure
- biological sequences
- systems biology
- protein families
- influenza virus
- biological processes
- protein interaction networks
- network model
- protein protein interaction networks
- regulatory networks
- network structure
- amino acid sequences
- genome sequences
- functional modules
- motif discovery
- saccharomyces cerevisiae
- text mining
- biological networks
- link prediction
- community structure
- co occurrence