NetBenchmark: a bioconductor package for reproducible benchmarks of gene regulatory network inference.
Pau BellotCatharina OlsenPhilippe SalembierAlbert Oliveras-VergésPatrick E. MeyerPublished in: BMC Bioinform. (2015)
Keyphrases
- gene regulatory networks
- undirected graphical models
- dynamic bayesian networks
- bayesian inference
- reverse engineering
- graphical models
- gene networks
- conditional random fields
- gene expression data
- structure learning
- network model
- exact inference
- probabilistic inference
- metropolis hastings algorithm
- probabilistic model
- probabilistic graphical models
- bayesian networks
- machine learning
- biological data
- high dimensional
- partition function
- data mining
- data sets