γ-TRIS: a graph-algorithm for comprehensive identification of vector genomic insertion sites.
Andrea CalabriaStefano BerettaIvan MerelliGiulio SpinozziStefano BrascaYuri PirolaFabrizio BenedicentiErika TenderiniPaola BonizzoniLuciano MilanesiEugenio MontiniPublished in: Bioinform. (2020)
Keyphrases
- dynamic programming
- detection algorithm
- graph based algorithm
- computational complexity
- graph structure
- learning algorithm
- graph model
- preprocessing
- cost function
- recognition algorithm
- probabilistic model
- random walk
- neural network
- simulated annealing
- worst case
- computational cost
- website
- tree structure
- directed graph
- k means
- objective function
- shortest path problem
- depth first search
- graph construction
- solution path
- identification rate