BRANE Cut: biologically-related a priori network enhancement with graph cuts for gene regulatory network inference.
Aurélie PirayreCamille CouprieFrédérique BidardLaurent DuvalJean-Christophe PesquetPublished in: BMC Bioinform. (2015)
Keyphrases
- graph cuts
- gene regulatory networks
- network model
- minimum cut
- loopy belief propagation
- energy minimization
- energy function
- markov random field
- image segmentation
- belief propagation
- dynamic bayesian networks
- undirected graphical models
- mean shift
- bayesian inference
- reverse engineering
- computer vision
- belief networks
- message passing
- graphical models
- approximate inference
- gene expression data
- bayesian networks
- partition function
- maximum a posteriori
- statistical models