Tsukuba BB: A Branch and Bound Algorithm for Local Multiple Alignment of DNA and Protein Sequences.
Paul HortonPublished in: J. Comput. Biol. (2001)
Keyphrases
- branch and bound algorithm
- protein sequences
- multiple alignment
- biological sequences
- sequence analysis
- sequence databases
- lower bound
- computational biology
- branch and bound
- multiple sequence alignment
- upper bound
- secondary structure
- np hard
- optimal solution
- amino acids
- protein structure
- combinatorial optimization
- sequence alignment
- motif discovery
- dna sequences
- binding sites
- molecular biology
- search space
- data structure
- neural network