PyWATER: a PyMOL plug-in to find conserved water molecules in proteins by clustering.
Hitesh PatelBjörn A. GrüningStefan GüntherIrmgard MerfortPublished in: Bioinform. (2014)
Keyphrases
- clustering algorithm
- sequence similarity
- clustering method
- k means
- chemical compounds
- hierarchical clustering
- cluster analysis
- protein sequences
- computational methods
- spectral clustering
- high dimensional data
- protein protein interactions
- protein structure prediction
- unsupervised learning
- data points
- information theoretic
- self organizing maps
- protein structure
- protein folding
- protein complexes
- protein function
- protein families
- phylogenetic analysis