DNA Assembly with De Bruijn Graphs Using an FPGA Platform.
Carl PoirierBenoit GosselinPaul FortierPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2018)
Keyphrases
- graph structure
- reconfigurable hardware
- motif discovery
- real time
- graph theoretic
- low cost
- high speed
- directed graph
- graph matching
- dna sequences
- social networks
- real time image processing
- hardware implementation
- field programmable gate array
- graph model
- random graphs
- complex structures
- verilog hdl
- parallel architecture
- sequence analysis
- parallel hardware
- biological sequences
- graph clustering
- spanning tree
- weighted graph
- graph theory
- signal processing
- graphical models