HIA: a genome mapper using hybrid index-based sequence alignment.

Jongpill Choi Kiejung Park Seong Beom Cho Myungguen Chung

Published in: Algorithms Mol. Biol. (2015)

Keyphrases

sequence alignment
phylogenetic analysis
comparative genomics
pairwise
sequence databases
dynamic programming
protein sequences
amino acids
multiple alignment
index structure
molecular biology
binding sites
machine learning
data sets
indexing techniques
gpu accelerated