MISCORE: a new scoring function for characterizing DNA regulatory motifs in promoter sequences.
Dianhui WangSarwar TapanPublished in: BMC Syst. Biol. (2012)
Keyphrases
- scoring function
- cis regulatory
- transcription factor binding sites
- binding sites
- transcription factors
- regulatory elements
- dna sequences
- biological sequences
- sequence alignment
- genome sequences
- motif discovery
- genome wide
- gene regulation
- multiple alignment
- sequence data
- dna binding
- genomic sequences
- scoring functions
- gene expression
- transcriptional regulation
- structure learning
- microarray
- ranking functions
- computational biology
- regulatory networks
- alternative splicing
- component analysis
- saccharomyces cerevisiae
- bayesian networks
- multiple sequence alignment
- semi supervised
- rna sequences
- human genome
- sequence databases
- statistical significance
- probabilistic model
- search engine