A One-Phase Parallel Algorithm for the Sequence Alignment Problem.
Thierry LecroqJean Frédéric MyoupoDavid SeméPublished in: Parallel Process. Lett. (1998)
Keyphrases
- parallel algorithm
- sequence alignment
- pairwise
- parallel computation
- dynamic programming
- shared memory
- parallel programming
- multiple alignment
- amino acids
- binding sites
- medial axis transform
- phylogenetic analysis
- cluster of workstations
- protein sequences
- gpu accelerated
- discovery of association rules
- parallel version
- parallel implementations
- protein structure
- binary search trees
- real time
- multiple sequence alignment
- smith waterman