Local Similarity Matrix for Cysteine Disulfide Connectivity Prediction from Protein Sequences.
NormanChristopher RodriguezPradeep ChowriappaSumeet DuaPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2020)
Keyphrases
- protein sequences
- amino acids
- similarity matrix
- protein secondary structure
- protein structure prediction
- protein classification
- computational biology
- multiple sequence alignments
- experimentally determined
- secondary structure
- spectral clustering
- protein structure
- protein function
- pairwise
- similarity measure
- co occurrence
- amino acid sequences
- prediction accuracy
- remote homology detection
- multiple sequence alignment
- dimension reduction
- physicochemical properties
- clustering method
- sequence analysis
- clustering algorithm
- machine learning
- latent semantic indexing
- natural language processing
- information extraction