A high-throughput gene sequence alignment strategy using parallel computing.
Rui YangYinhong ZhaoYuncong SuChao PanHuilong DuanNing DengPublished in: BMEI (2014)
Keyphrases
- high throughput
- sequence alignment
- parallel computing
- microarray
- pairwise
- systems biology
- biological data
- genome wide
- shared memory
- dynamic programming
- binding sites
- gene expression
- protein sequences
- amino acids
- biological knowledge
- computing systems
- interaction networks
- microarray data
- protein protein interactions
- data acquisition
- comparative genomics
- mass spectrometry
- genomic data
- gene expression data
- molecular biology
- protein structure
- experimental conditions
- gene selection
- single nucleotide polymorphisms
- message passing
- rna seq
- parallel algorithm