Top-Down Approach for Protein Binding Sites Prediction Based on Fuzzy Pattern Trees.
Georgina MircevaAndrea KulakovPublished in: ICT Innovations (2012)
Keyphrases
- binding sites
- protein interaction
- dna binding
- protein protein
- sequence alignment
- regulatory elements
- gene expression
- transcription factor binding sites
- drosophila melanogaster
- predicting protein
- protein protein interactions
- sequence data
- transcription factors
- dna sequences
- drug design
- computational methods
- influenza virus
- motif discovery
- regulatory networks
- protein families
- physico chemical
- protein interaction networks
- microarray
- high throughput
- protein structure prediction
- protein sequences
- genome sequences
- statistical significance
- component analysis
- cis regulatory
- protein structure
- biological data
- contact map
- genome wide
- gene ontology
- protein function
- protein complexes
- functional modules
- biological processes
- pairwise
- transcriptional regulation
- coding regions
- biological sequences