Protein Motif Comparator using PSO K-Means.
R. GowriR. RathipriyaPublished in: Int. J. Appl. Metaheuristic Comput. (2016)
Keyphrases
- k means
- structural motifs
- imperialist competitive algorithm
- protein structural
- particle swarm optimization pso
- particle swarm optimization
- particle swarm optimizer
- protein sequences
- particle swarm optimization algorithm
- pso algorithm
- variable weighting
- protein structure
- clustering algorithm
- sequence analysis
- amino acids
- clustering method
- protein folding
- particle swarm optimisation
- transcription factor binding sites
- regulatory elements
- dna sequences
- motif discovery
- protein structure prediction
- data clustering
- spectral clustering
- tertiary structure
- differential evolution
- optimization algorithm
- hybrid algorithm
- swarm intelligence
- particle swarm
- expectation maximization
- hierarchical clustering
- multi objective
- protein function
- convergence speed
- sequence data
- comparative genomics
- contact map
- subcellular localization
- evolutionary algorithm
- genetic algorithm
- biological sequences
- sequence alignment
- fitness function
- global optimization
- cluster analysis
- mass spectrometry
- amino acid sequences
- computational biology
- metaheuristic
- ant colony optimization
- initial cluster centers
- self organizing maps
- document clustering
- genetic algorithm ga