MHCRoBERTa: pan-specific peptide-MHC class I binding prediction through transfer learning with label-agnostic protein sequences.
Fuxu WangHaoyan WangLizhuang WangHaoyu LuShizheng QiuTianyi ZangXinjun ZhangYang HuPublished in: Briefings Bioinform. (2022)
Keyphrases
- binding peptides
- transfer learning
- protein sequences
- major histocompatibility complex
- mhc class ii
- protein classification
- amino acids
- learning tasks
- label information
- computational biology
- labeled data
- knowledge transfer
- reinforcement learning
- structure learning
- machine learning
- protein function
- collaborative filtering
- transfer knowledge
- protein secondary structure
- semi supervised learning
- text classification
- multi label
- protein structure
- secondary structure
- amino acid sequences
- tandem mass spectra
- sequence analysis
- text mining
- learning algorithm
- active learning
- text categorization
- domain specific
- protein structure prediction
- cross domain
- class labels
- unlabeled data
- mass spectra
- data analysis
- ms ms
- multiple sequence alignments
- machine learning algorithms
- protein structural
- feature selection