Predicting functional residues of protein sequence alignments as a feature selection task.
Chris HaddowJustin PerryMarcus DurrantJoe FaithPublished in: Int. J. Data Min. Bioinform. (2011)
Keyphrases
- protein sequences
- feature selection
- multiple alignment
- multiple sequence alignment
- predicting protein
- secondary structure
- sequence alignment
- multiple sequence alignments
- amino acid sequences
- protein structure
- computational biology
- amino acids
- protein function
- protein classification
- protein families
- biological sequences
- protein protein
- sequence analysis
- feature set
- protein structure prediction
- amino acid composition
- structural motifs
- protein structural
- protein structure and function
- pairwise
- support vector
- solvent accessibility
- machine learning
- protein folding
- feature subset
- logistic regression
- computational approaches
- coarse grained
- support vector machine
- feature space